Astral Codex Ten

Reuters

23 min read

Reuters

Article

Reuters is a recurring publication in the Astral Codex Ten archive, appearing 4 times across 4 issues between August 20, 2021 and April 09, 2024. The archive places it in contexts such as “https://www.reuters.com/article/us-biogen-alzheimers/biogen-eisai-scrap-alzheimer-drug-trials-idUSKCN1R213G”; “March 2022: https://www.reuters.com/world/russia-running-out-precision-munitions-ukraine-war-pentagon-official-2022-03-25/”; “There was a Reuters story that the firing was precipitated by a breakthrough”. It most often appears alongside COVID, Biden, COVID-19.

Metadata

  • Category: Publications
  • Mention count: 4
  • Issue count: 4
  • First seen: August 20, 2021
  • Last seen: April 09, 2024

Appears In

Source Context

Recovered passages from the original issue text. When the raw archive preserved outbound links inside the source passage, they are listed directly under the quote.

Highlights From The Comments On Aducanumab
August 20, 2021 · Original source
- The trial was halted for futility: https://www.reuters.com/article/us-biogen-alzheimers/biogen-eisai-scrap-alzheimer-drug-trials-idUSKCN1R213G
Inline links: https://www.reuters.com/article/us-biogen-alzheimers/biogen-eisai-scrap-alzheimer-drug-trials-idUSKCN1R213G
Sorry, I Still Think I Am Right About The Media Very Rarely Lying
December 29, 2022 · Original source
If I’m understanding this site right, the likely explanation is that the spike represents Milwaukee reporting its absentee ballots. Milwaukee usually reports precinct by precinct, but it reported all its absentee ballots at once, and this was during COVID when lots of people voted absentee. Milwaukee is a dense city full of black people, so its votes were overwhelmingly Democrat. So Vote Pattern Analysis is right that there was a weird sudden spike in Biden votes in the middle of the night much bigger than any plausible precinct size. It just has an innocent explanation.
Inline links: this site
March 2022: https://www.reuters.com/world/russia-running-out-precision-munitions-ukraine-war-pentagon-official-2022-03-25/
Inline links: https://www.reuters.com/world/russia-running-out-precision-munitions-ukraine-war-pentagon-official-2022-03-25/
The first article is titled Russia Running Out Of Precision Munitions In Ukraine War - Pentagon Official. It states that Undersecretary of Defense Policy Colin Kahl claimed Russia was running out of precision munitions. I have no doubt that Undersecretary of Defense Policy Colin Kahl did in fact claim that, so the media isn’t lying.
Inline links: Russia Running Out Of Precision Munitions In Ukraine War - Pentagon Official
23
December 05, 2023 · Original source
The only problem is that here it looks like the probability gradually declined from October to late November, whereas on the Manifold site itself it’s clear that it was steady during that time and then collapsed on the day he was fired. I think this is a bug in the embed. There was a Reuters story that the firing was precipitated by a breakthrough in a model called Q*, which had learned to do math. The market seems to think Q* exists, but is not a breakthrough, and wasn’t involved in the firing.
Inline links: a Reuters story
There was a Reuters story that the firing was precipitated by a breakthrough in a model called Q*, which had learned to do math. The market seems to think Q* exists, but is not a breakthrough, and wasn’t involved in the firing.
Inline links: a Reuters story
1: Last month, we talked about the CFTC (regulatory body) denying Kalshi’s request to have election questions on their prediction market. Kalshi is now suing the CFTC to reverse their decision, saying that “the contracts contain no unlawful acts prohibited under the Commodity Exchange Act and therefore, the CFTC has no power to block them”. I have to admit I’m surprised by this - I thought Kalshi was trying to cultivate good will with the CFTC, and this seems pretty adversarial. Also, if they win, what’s left of the CFTC’s ability to regulate prediction markets at all? Any regulation experts want to weigh in?
Inline links: denying, is now suing the CFTC to reverse their decision
Highlights From The Comments On The Lab Leak Debate
April 09, 2024 · Original source
This collapses the ‘extreme coincidence’ claim, which as explained above, turns lab-leak into the leading hypothesis. My strongest disagreement is with his Point 3 - the inference from other seafood-market-based COVID spread events. Saar writes: A common objection to this method is that these outbreaks are caused by cold-chain products brought into these markets. However, this still fails to explain why markets form these early clusters and not the many other places where cold chain products are delivered to. Additionally, this only demonstrates the importance of cold wet surfaces in preserving SARS2 infectivity, further strengthening the hypothesis in method 1 that a crowded location with many wet surfaces like HSM is highly conducive for rapid SARS2 spread. Last, it also opens the possibility that the HSM outbreak was also caused by cold-chain products. This would reduce the significance of Wuhan being the outbreak location (as the product could have come from anywhere), but since the other evidence for lab-leak is so strong, Wuhan can be given no weight and still lab-leak would be highly likely – Rootclaim’s conclusion will only drop from 94% to 92%. Most of these outbreaks have been traced back to either a migrant worker (eg a fisherman from a country with COVID sells fish at the market of a country with Zero COVID) or a cold chain product. For example, here’s Dai et al on the Xinfadi outbreak, the most important event of this type: According to a joint publication by the Beijing CDC and 13 research institutions, the outbreak at Xinfadi Market was likely to be initiated by fomite transmission from contaminated foods imported via cold-chain logistics (Pang et al., 2020; Beijing Daily, 2020b). Based on the epidemiological investigations at the Xinfadi Market, the researchers preliminarily concluded that booth #S14 in the aquaculture product selling area on the basement floor of the primary trading hall was the source of the initial transmission. Specifically, five customers were tested positive for IgG/IgM antibodies against SARS-CoV-2 in serological screenings, all of whom visited booth #S14 on May 30 and 31, 2020. On May 30, 2020, the owner of booth #S14 procured imported and fully packaged salmon from a company's cold storage warehouse, then cut and processed the salmon for sale at the Xinfadi Market. Laboratory tests showed that sample swabs from five salmon fish from this supplier were tested positive by examining all salmon in the original sealed packages (n = 3582) in the cold storage facility. Viral genome sequencing showed that the viral strain isolated from one of the positive salmon swabs was homologous to that isolated from the infected persons and environmental samples at the Xinfadi Market (Beijing Daily, 2020b). The joint study reported that an ancestral strain isolated from the Xinfadi Market in Beijing was markedly different from the strains identified in two preceding outbreaks in China and the sequences obtained in March 2020 in Beijing. Phylogenetic analysis assigned the ancestral Xinfadi strain to clade B.1.1. Given the fact that the ancestral sequences were mainly identified in Europe, the strain was more likely to be imported to Beijing rather than derived from strains previously circulating in China (Pang et al., 2020). I know China has a bias towards believing frozen food COVID explanations, but this all sounds pretty convincing to me. Why is it more often markets than other places with cold chain products? Partly it’s the migrant workers - a lot of seafood markets are right next to seaports, and the contact tracing eventually traces back to a fisherman who came in through the seaport - I don’t think this is any more mysterious than epidemics often starting via airport or any other transportation hub. But even just keeping the focus on cold chain products, - there have also been outbreaks in seafood distribution warehouses, on docks, and in a seafood processing work area. Markets have many more people than any of those locations, and maybe (total speculation) cutting on cutting boards could aerosolize bits of fish. The strongest evidence that the Wuhan / Huanan Seafood Market epidemic wasn’t caused by migrant workers or imported seafood products is that there was no previous COVID-infected source of workers or seafood. If there had been, we would have noticed when the outbreak there spread (see Section 1.4 on Brazil). Responses to a few of Saar’s other points below: How many locations other than markets provide an interface with wildlife? Were markets actually identified in advance to be high-risk spillover locations or only in retrospect? I think scientists had called wet markets as an especially dangerous potential transmission location in advance. See for example Infectious Diseases Emerging From Chinese Wet Markets, published in 2006, which says: » “In Chinese wet-markets, unique epicenters for transmission of potential viral pathogens, new genes may be acquired or existing genes modified through various mechanisms such as genetic reassortment, recombination and mutation. The wet-markets, at closer proximity to humans, with high viral burden or strains of higher transmission efficiency, facilitate transmission of the viruses to humans.” In 2004, a paper on an emerging bird flu expressed hope that it would not spread too widely, but concluded that: » “Even in the event of yet another lucky escape, more measures must be taken to limit the amplification of viruses with pandemic potential in the wet markets around the world.” In 2007, Reuters published an investigation: Chinese Markets May Be Breeding Ground For Deadly Viruses, which said things like: » “We face similar threats from other viruses and such epidemics can happen because we continue to have very crowded markets in China," said Lo Wing-lok, an infectious disease expert in Hong Kong. "Even though official measures are in place, they are not faithfully followed. We are not talking about just civet cats, but all animals," he added.” Wet Markets, A Continuing Source Of SARS And Influenza, published 2004, is admittedly focusing on the next SARS1 outbreak instead of on SARS2, but gets bonus points for mentioning both wet markets and labs as likely causes of the next pandemic: » “Will SARS reappear? This question confronts public-health officials worldwide, particularly infectious disease personnel in those regions of the world most affected by the disease and the economic burden of SARS, including China, Taiwan, and Canada. Will the virus re-emerge from wet markets or from laboratories working with SARS CoV, or are asymptomatic infections ongoing in human beings? Similar questions can be asked about a pandemic of influenza that is probably imminent. Knowledge of the ecology of influenza in wet markets can be used as an early-warning system to detect the reappearance of SARS or pandemic influenza.” Saar mentions that there are several other possible sources like restaurants or farms. I think Peter demonstrated during the debate that pandemics are unlikely to start in rural areas, so farms aren’t that important. Restaurants mostly source their products from wet markets. During SARS1, some pandemics started in restaurants because they kept the civets in cages next to the diners (like how some Western restaurants keep lobsters). After SARS1, restaurants stopped doing that and became a less likely spillover location. Saar again: Scott quotes Peter, who implies that under the lab-leak hypothesis, we would expect the confirmed early cases to be centered around the WIV. However, cases are not expected to center on the lab. The lab is not spraying viruses into the air or hosting thousands of locals daily. If a worker gets infected, they spread the virus to their friends and family at completely different locations. In most places with an outbreak of known origin, epidemics show some geographic clustering. This has been true ever since the very beginning of epidemiology, when John Snow successfully traced a cholera outbreak back to its origin at a contaminated water pump by taking the center of the map of cholera cases. This isn’t a 100% law of nature; an infected lab worker might get lucky and not pass it to any of his lab co-workers. Still, we might expect him to infect his family, the stores he went to, or the restaurants he went to. If he lived near his workplace, these might also be near the lab. If he didn’t - let’s say he lived on the other side of town and had a long commute - he would start a cluster near his house, or his favorite store, or his favorite restaurant. Then the people there would infect their families/co-workers/stores/restaurants. The cluster would start somewhere! Sure, some people would infect nobody close to their work or home, and instead just infect one person a hundred miles away who they breathed on during a trip - but this is the exception, not the rule. So you wouldn’t expect a totally random distribution of cases all around Wuhan. There would be one center, or maybe several centers. But none of the claims that COVID was quietly spreading for months before the wet market have pointed to some alternate center of cases. If COVID was spreading for months before the lab, it somehow spread in a completely diffuse geographical pattern, with people exactly as likely to infect people far away from them as close to them - until it reached the wet market in December, and then spread in the normal center-radiating-outward way that every other infection spreads. All the evidence trying to support a spillover at the market is based on complex models with many single points of failure, built from unreliable and biased data. Therefore, it is difficult to give this evidence significant weight as there is always a possibility of errors in the data or its interpretation. More on this in the UFO comment below. Disagree. “First known case was at a wet market” is as simple as it comes. Certainly it’s less complex than “the virus has a 12 nucleotide insertion at the furin cleavage site, and even though those sometimes happen by natural recombination probably this one didn’t, and even though it looks out of frame maybe there was some weird thing going on with serine that made it in frame this one time only”, which is Saar’s star piece of evidence. I understand Saar thinks he can come up with lots of objections to “seen near wet market is suspicious for wet market origin”, then claim that getting over those objections requires “complexity”. But if Peter had no dignity, he could also come up with lots of objections to “seen in same city as Wuhan Institute of Virology is suspicious". He could say that maybe the civet farms of Hubei province were uniquely blah blah blah, and then Saar would have to prove that the civet farms weren’t uniquely blah blah blah, and then he could say “Oh, sure seems like you have a complex model with lots of unique points of failure, it all depends on fifty facts about the regulation of civet farms.” To illustrate what a market looks like in a real zoonotic pandemic, consider this study from SARS1. The researchers went to a random market and sampled the wildlife sold there. 4 of 6 civets sampled were positive, and 3 of them were phylogenetically distinct (i.e. infected in completely different places). A scientist I talked to says the 3 phylogenetically distinct lineages were most likely sampling errors. Still, this seems irrelevant to me since, again, no raccoon-dogs were tested. Scott explains that Covid’s closest known relative, BANAL-52, is rare and so it’s highly unlikely the WIV would’ve had it available as the starting point to engineer Covid . . . This is a basic mistake. SARS2 is not based on BANAL-52 but a relative of it. There is nothing unlikely here. No BANAL-52 relative close enough to create COVID from has ever been discovered. By mentioning BANAL-52, I was trying to be maximally charitable to the lab leak side. In order to create COVID, they would need a virus very close to COVID. But in years and years of searching, nobody has ever discovered a virus like this. Therefore it must be rare. As a way of bounding how rare, let’s see how rare the closest virus ever discovered is. That’s BANAL-52. It is very rare. Therefore, the COVID ancestor must be rarer than that. I don’t know how strong this argument is, because maybe there are millions of rare viruses capable of becoming pandemics, such that getting any one of them is very easy, even though each one individually is rare. The version of this I find convincing is that it should be a probabilistic cost to say that WIV did gain-of-function on a seemingly undiscovered and so-far-very-hard-to-discover rare virus instead of on any of the usual SARS-like viruses that people do their gain-of-function research on. Overall, all attempts to portray [Connor Reed] as an unstable, delusional person were unsuccessful. He is an ordinary person who very accurately described Covid-19 symptoms in real-time and claims to have received a positive test result. The timing and location matches the lab leak hypothesis and is impossible for the HSM claim. Therefore, they must discredit him. It is worth noting here the biased evidentiary standards used by zoonotic proponents. Reed’s testimony about his sickness, given on camera to multiple outlets, is deceitful and should be ignored. Yet, an anonymous voice testimony in one Chinese publication is definitely identified as Mr. Chen (another possible pre-HSM case) and should be considered reliable. See above for why I don’t trust Connor Reed. I’m not sure why Saar attributes Mr. Chen to “an anonymous voice testimony in one Chinese publication”. When I looked for Chen information, I got this thread, where it’s attributed to two Chinese hospital doctors, cross-checked with the Chinese COVID data repository, and double-cross-checked with the supplementary table in a peer-reviewed paper published by a team of Wuhan doctors. To understand how ridiculous the claim is that the HKU1 insertion looks just as engineered as SARS2’s, here are their alignments. Hopefully that should be enough. COVID: HKU1: I’m not a virologist, but I question how this comparison works. Surely HKU1 got its insert on some specific day. If you take the virus the day before, and then the other virus the day after, there will be no differences except the insert, and it will look just like COVID (ie an insert without many other mutations). The fact that the COVID comparison has few mutations, and the HKU1 insert has many mutations, just shows that whatever older virus we chose to compare HKU1 to is more distant from HKU1 than BANAL-52 (or whatever) is from COVID. Or am I missing something here? [The evidence that China tried to cover up zoonosis from the start] is untrue. They clearly said from the start this is a zoonotic spillover at HSM, and at least part of the government went to immense efforts to identify the animal, close farms, etc. (and of course couldn’t find any infected animal). Only in late 2020 did they start suspecting an import from cold-chain products after having multiple outbreaks that seem related to cold-chain products. From a Vox article from March 2023: From the start, the Chinese government interfered with efforts by both Chinese and international experts to study the pandemic, including its origins. Reporting by the AP found that even as WHO officials were publicly praising China’s cooperation, behind the scenes they were complaining about lack of access and a refusal to share data. Within months of the beginning of the pandemic, the Chinese government imposed restrictions on academic research into the origins of the novel coronavirus … China’s intransigence wasn’t unusual — countries are rarely eager to confirm that they’re the source of a deadly disease — but it went beyond the norm. International investigators weren’t permitted to see the market until more than a year after the pandemic began and a WHO-affiliated team was allowed a highly choreographed and controlled visit. The resulting report that came out of the Wuhan visit, which dismissed the possibility of a lab origin, pointed the finger at some kind of zoonotic spillover while concluding that it was unlikely that the spread started at the market, which surprised many experts. It also found that it was “possible” that the virus had been introduced via contaminated frozen food products from abroad. While few experts took that possibility seriously, it fit a narrative the Chinese government had been pushing, against nearly all evidence, that the pandemic had in fact not originated in China. “China just doesn’t want to look bad,” Filippa Lentzos, a biosecurity expert at King’s College London, told Science last August. “They need to maintain an image of control and competence. And that is what goes through everything they do.” […] it seems clear that with more cooperation, scientists could have been looking at raccoon dogs a year or more ago. “The big issue right now is that this data exists and that it is not readily available to the international community,” Maria Van Kerkhove, the WHO’s Covid-19 technical lead, told reporters on Friday. “This is first and foremost absolutely critical, not to mention that it should have been made available years earlier, but that data needs to be made accessible to individuals who can access it, who can analyze it and who can discuss it with each other.” The irony is that by making it so difficult to properly investigate a zoonotic origin of Covid, the Chinese government has created a vacuum that has been filled by claims on all sides, including the much more damning accusation that the pandemic was the result of a lab error at the Wuhan Institute of Virology. For what it’s worth, my timeline of Chinese denials and coverups looks like this: December: COVID doesn't exist, it's all lies Early January: Fine, it exists, but it’s just some wet market thing that can't spread from person to person Late January: Fine, it can spread from person to person, but we’ve got it under control now. February: Fine, it’s out of control, but you would not believe how great our response was. We're basically heroes. March: COVID was a US bioweapon, or possibly came from Italy. April: Chinese people are banned from researching the origins of COVID without government permission. 2: Comments Arguing Against Lab Leak 2.1: Is the pandemic starting near WIV reverse correlation? randomstringofcharacters wrote: Isn't [the pandemic starting near the lab] a reverse correlation issue? The lab is situated there because it's an area where coronaviruses were found in the past. Many people had this question, but Wuhan Institute of Virology was founded in 1956, didn’t originally focus on coronaviruses, and isn’t in a coronavirus hot spot. Most of WIV’s coronavirus samples come from Yunnan, about a thousand miles away. COVID’s closest relatives were found in Laos, almost two thousand miles away. During the debate, both Saar and Peter calculated the odds of a natural pandemic arising in Wuhan by dividing the population of Wuhan by the total urban population of East Asia (Saar) or South China (Peter). Saar got 1.5%, Peter got 3% (he later said this could be as high as 10% because it was a central hub in the wildlife trade). This isn’t an Official Position and I don’t think anyone else shares it, but during the debate Peter pointed out a few times that there are plenty of disease-ridden bats in Hubei (the province Wuhan is in), and that it’s not impossible that a bat virus currently known only in Laos could be active in Hubei. Still, this is the minority viewpoint and most scientists just think it involved something about the wildlife trade. 3: Other Points That Came Up 3.1: Apology to Peter re: extreme odds quiet_NaN wrote: Hot take: Peter clearly failed to convince anyone. The lab leak odds, in log10 (i.e. orders of magnitude are): Peter -20.7 Saar 2.7 Eric -3.1 Will -2.5 Scott -1.2 Daniel -1.4 One of these numbers is clearly an outlier. Scott mentions it and calls it "trolling", I would argue that it is debating in bad faith. 2e-21 is a ratio which is just silly. For one thing, the gain of function at WiV pathway is not the only pathway towards a lab leak. The WIV could also have released a naturally occurring coronavirus at the wet market. At 2e-21 odds, we would probably have to consider the possibility that the WIV built a time machine and went back in time to infect the wet market. I might have screwed up here - or at least I should have emphasized the “trolling” part. Peter complained about my presentation of his extreme-odds slide, saying: This is basically accurate. During the debate, Saar gave lots of different numbers. I don’t want to say exactly what the different numbers meant, because in earlier drafts of my post, Saar said I misunderstood them. My impression were that some of his numbers were conservative, others were central, others were extreme, others were adjusted-for-out-of-model-error, others were not-adjusted, etc. In an early draft of the post, I gave higher numbers for Saar. Saar asked me to replace them with the numbers I ended up using. I decided to agree, because I wanted to represent Saar fairly with the numbers he most centrally believed, but also because these were closest to the numbers on his Rootclaim site so it wasn’t like he was making them up just to fool me. Peter didn’t argue quite as hard, and also he didn’t have anything like the Rootclaim site, so I just took his first set of numbers. Trying to piece things together, I think a reasonable summary would be: During the debate, Saar mentioned 700-million-to-one odds in favor of lab leak, not because he thought this was plausible, but just as a discussion of where the situation would end up if you didn’t adjust for human fallibility.
Inline links: Dai et al, Pang et al., 2020, Beijing Daily, 2020b, seafood distribution warehouses, on docks, a seafood processing work area, Infectious Diseases Emerging From Chinese Wet Markets, a paper on an emerging bird flu, Chinese Markets May Be Breeding Ground For Deadly Viruses, Wet Markets, A Continuing Source Of SARS And Influenza, this study from SARS1, this thread, https://substackcdn.com/image/fetch/$s_!dcI7!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fc5aabd26-d70b-4f35-97cb-96d351bb52fd_552x920.png, https://substackcdn.com/image/fetch/$s_!UQ14!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F2411167c-1405-4fde-914b-6388ee498523_935x851.jpeg, a Vox article, wrote, wrote, https://twitter.com/tgof137/status/1773797640607850745